Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Gm18307-201ENSMUST00000206864 949 ntBASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb9E9Q5G2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm12485-201ENSMUST00000119641 291 ntBASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm12138-201ENSMUST00000122180 951 ntBASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb9E9Q5G2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Gm44719-201ENSMUST00000206404 149 ntBASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Gm24447-201ENSMUST00000083977 338 ntBASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb9E9Q5G2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb9E9Q5G2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms