Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Gm9139-201ENSMUST00000218817 700 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.54□□□□□ -0.24
Col6a3E9PWQ3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Gm15432-201ENSMUST00000121106 195 ntBASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col6a3E9PWQ3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Gm12218-201ENSMUST00000117666 399 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Carlr-201ENSMUST00000181515 2574 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Gm12380-201ENSMUST00000119012 544 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col6a3E9PWQ3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a3E9PWQ3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gm11979-201ENSMUST00000119629 743 ntBASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms