Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccnb1ip1D3Z3K2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm6345-202ENSMUST00000180900 204 ntBASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm27867-201ENSMUST00000184778 125 ntBASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm37230-201ENSMUST00000194491 818 ntBASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm9682-201ENSMUST00000197505 556 ntBASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm18032-201ENSMUST00000222541 538 ntBASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccnb1ip1D3Z3K2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm10275-202ENSMUST00000168697 495 ntBASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms