Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn7aB1AYL1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm25214-201ENSMUST00000104573 129 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm6458-201ENSMUST00000211573 635 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm9368-201ENSMUST00000219348 831 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm8227-201ENSMUST00000223306 571 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Gm19163-201ENSMUST00000223313 780 ntBASIC17.52■□□□□ 0.39
Scn7aB1AYL1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Gm44364-201ENSMUST00000198368 141 ntBASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scn7aB1AYL1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Gm4857-201ENSMUST00000192718 785 ntBASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn7aB1AYL1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn7aB1AYL1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms