Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3n-3A0A0G2JEM0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rps4l-201ENSMUST00000071745 943 ntBASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm7230-201ENSMUST00000173026 815 ntBASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm8749-201ENSMUST00000117737 331 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms