Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm5566-201ENSMUST00000116118 459 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm44608-201ENSMUST00000206827 855 ntBASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dupd1-202ENSMUST00000224735 548 ntBASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms