Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb3S4R1G7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb3S4R1G7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb3S4R1G7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm29310-201ENSMUST00000185468 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21825-201ENSMUST00000185728 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm29109-201ENSMUST00000185895 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21896-201ENSMUST00000186520 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21873-201ENSMUST00000186728 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21794-201ENSMUST00000187056 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21880-201ENSMUST00000187275 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21826-201ENSMUST00000187451 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21198-201ENSMUST00000188393 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21749-201ENSMUST00000189343 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21901-201ENSMUST00000189568 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm29424-201ENSMUST00000189716 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm28599-201ENSMUST00000189838 694 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21867-201ENSMUST00000189917 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm29269-201ENSMUST00000190087 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21722-201ENSMUST00000190153 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm28423-201ENSMUST00000190701 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21899-201ENSMUST00000190745 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21910-201ENSMUST00000191163 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21849-201ENSMUST00000191571 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm28678-201ENSMUST00000191593 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm20910-201ENSMUST00000193268 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm21871-201ENSMUST00000194621 696 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 AA619741-201ENSMUST00000195095 646 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms