Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc166S4R181 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.35□□□□□ -0.27
Ccdc166S4R181 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc166S4R181 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc166S4R181 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc166S4R181 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc166S4R181 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.34□□□□□ -0.27
Ccdc166S4R181 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gm11918-201ENSMUST00000121660 179 ntBASIC13.34□□□□□ -0.27
Ccdc166S4R181 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.34□□□□□ -0.27
Ccdc166S4R181 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gm9899-201ENSMUST00000065519 555 ntBASIC13.34□□□□□ -0.27
Ccdc166S4R181 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc166S4R181 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc166S4R181 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc166S4R181 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc166S4R181 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc166S4R181 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.33□□□□□ -0.28
Ccdc166S4R181 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Mir1938-201ENSMUST00000158746 100 ntBASIC13.33□□□□□ -0.28
Ccdc166S4R181 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.33□□□□□ -0.28
Ccdc166S4R181 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.33□□□□□ -0.28
Ccdc166S4R181 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc166S4R181 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc166S4R181 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc166S4R181 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc166S4R181 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc166S4R181 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc166S4R181 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms