Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clcf1Q9QZM3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm24694-201ENSMUST00000180054 110 ntBASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm27663-201ENSMUST00000184839 110 ntBASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm7730-201ENSMUST00000212486 454 ntBASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm2423-201ENSMUST00000074863 733 ntBASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clcf1Q9QZM3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.65□□□□□ -0.39
Clcf1Q9QZM3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm15321-201ENSMUST00000121290 288 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm16215-201ENSMUST00000161990 637 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Clcf1Q9QZM3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Gm12882-201ENSMUST00000121696 517 ntBASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.63□□□□□ -0.39
Clcf1Q9QZM3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms