Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdc42ep4Q9JM96 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Gm19220-201ENSMUST00000222682 803 ntBASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdc42ep4Q9JM96 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Cdc42ep4Q9JM96 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdc42ep4Q9JM96 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Gm4984-201ENSMUST00000115987 360 ntBASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Mir125a-201ENSMUST00000083545 68 ntBASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdc42ep4Q9JM96 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms