Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.49■□□□□ 0.23
Ube3bQ9ES34 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3bQ9ES34 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube3bQ9ES34 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Gm13689-201ENSMUST00000119360 685 ntBASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube3bQ9ES34 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Ube3bQ9ES34 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3bQ9ES34 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3bQ9ES34 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ube3bQ9ES34 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ube3bQ9ES34 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms