Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tubb3Q9ERD7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Tubb3Q9ERD7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tubb3Q9ERD7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tubb3Q9ERD7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tubb3Q9ERD7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tubb3Q9ERD7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Gm13823-201ENSMUST00000119930 345 ntBASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tubb3Q9ERD7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms