Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm37497-201ENSMUST00000195830 798 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Rps4l-202ENSMUST00000204242 789 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-4Q9EQM3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm7029-201ENSMUST00000173226 450 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm37922-201ENSMUST00000195596 455 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Nsd1-205ENSMUST00000224693 852 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Gm10146-201ENSMUST00000072739 309 ntBASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-4Q9EQM3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Mir698-201ENSMUST00000102164 109 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm25668-201ENSMUST00000157700 129 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm22902-201ENSMUST00000158488 302 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm20482-202ENSMUST00000174729 825 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm37489-201ENSMUST00000191883 159 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.17□□□□□ -0.14
Nkx2-4Q9EQM3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms