Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
Cpsf1Q9EPU4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Mir1938-201ENSMUST00000158746 100 ntBASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf1Q9EPU4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Gm8213-201ENSMUST00000118191 441 ntBASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf1Q9EPU4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf1Q9EPU4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Cpsf1Q9EPU4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Itm2b-204ENSMUST00000228637 783 ntBASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms