Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Cdc40Q9DC48 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdc40Q9DC48 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdc40Q9DC48 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdc40Q9DC48 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm27631-201ENSMUST00000184163 466 ntBASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdc40Q9DC48 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Gm7488-201ENSMUST00000117148 684 ntBASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.93□□□□□ -0.34
Cdc40Q9DC48 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdc40Q9DC48 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdc40Q9DC48 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms