Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
U2af1Q9D883 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.27■□□□□ 0.52
U2af1Q9D883 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.27■□□□□ 0.52
U2af1Q9D883 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.27■□□□□ 0.52
U2af1Q9D883 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Mir6392-201ENSMUST00000184924 108 ntBASIC18.27■□□□□ 0.52
U2af1Q9D883 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
U2af1Q9D883 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.27■□□□□ 0.52
U2af1Q9D883 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.27■□□□□ 0.52
U2af1Q9D883 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Gm6180-201ENSMUST00000065243 498 ntBASIC18.27■□□□□ 0.52
U2af1Q9D883 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.27■□□□□ 0.52
U2af1Q9D883 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
U2af1Q9D883 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.27■□□□□ 0.51
U2af1Q9D883 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2af1Q9D883 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
U2af1Q9D883 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2af1Q9D883 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
U2af1Q9D883 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
U2af1Q9D883 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
U2af1Q9D883 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
U2af1Q9D883 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
U2af1Q9D883 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.26■□□□□ 0.51
U2af1Q9D883 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
U2af1Q9D883 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.26■□□□□ 0.51
U2af1Q9D883 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
U2af1Q9D883 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.26■□□□□ 0.51
U2af1Q9D883 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.26■□□□□ 0.51
U2af1Q9D883 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
U2af1Q9D883 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
U2af1Q9D883 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
U2af1Q9D883 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
U2af1Q9D883 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.24■□□□□ 0.51
U2af1Q9D883 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Gm12341-201ENSMUST00000119724 503 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 Gm11424-201ENSMUST00000121929 829 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Gm18018-201ENSMUST00000198273 408 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 Gm6745-201ENSMUST00000199216 526 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 Gm9794-201ENSMUST00000202370 423 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.24■□□□□ 0.51
U2af1Q9D883 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
U2af1Q9D883 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
U2af1Q9D883 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.24■□□□□ 0.51
U2af1Q9D883 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
U2af1Q9D883 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.23■□□□□ 0.51
U2af1Q9D883 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms