Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm8584-201ENSMUST00000171982 758 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm20553-201ENSMUST00000204205 844 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Gm14494-201ENSMUST00000118786 435 ntBASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Gm44771-201ENSMUST00000206975 626 ntBASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
Ssr1Q9CY50 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr1Q9CY50 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr1Q9CY50 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms