Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm8927-201ENSMUST00000181978 981 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm28631-201ENSMUST00000190740 334 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm45878-201ENSMUST00000211839 241 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm3222-201ENSMUST00000071282 990 ntBASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otud1Q9CUB6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm6912-201ENSMUST00000117218 544 ntBASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm13385-201ENSMUST00000121089 220 ntBASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm37917-201ENSMUST00000194711 392 ntBASIC13.16□□□□□ -0.3
Otud1Q9CUB6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otud1Q9CUB6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Gm15240-201ENSMUST00000118156 720 ntBASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.15□□□□□ -0.3
Otud1Q9CUB6 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms