Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm12363-201ENSMUST00000122250 668 ntBASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Mir497b-201ENSMUST00000093601 125 ntBASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdh23Q99PF4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm13408-201ENSMUST00000119822 798 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm13935-201ENSMUST00000121859 798 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm29741-201ENSMUST00000192667 421 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm15276-201ENSMUST00000145953 498 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm19208-201ENSMUST00000213861 912 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm8194-201ENSMUST00000159783 859 ntBASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh23Q99PF4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm25214-201ENSMUST00000104573 129 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm27438-201ENSMUST00000183480 110 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm45118-201ENSMUST00000208928 825 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.84□□□□□ -0.19
Cdh23Q99PF4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms