Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gm6222-201ENSMUST00000120787 396 ntBASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gm27430-201ENSMUST00000184585 107 ntBASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gm44333-201ENSMUST00000197168 107 ntBASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp1b1Q99LU0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Chmp1b1Q99LU0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Acot6-202ENSMUST00000222921 3622 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm15920-201ENSMUST00000118998 402 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm29310-201ENSMUST00000185468 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21825-201ENSMUST00000185728 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm29109-201ENSMUST00000185895 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21896-201ENSMUST00000186520 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21873-201ENSMUST00000186728 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21794-201ENSMUST00000187056 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21880-201ENSMUST00000187275 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21826-201ENSMUST00000187451 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21198-201ENSMUST00000188393 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21749-201ENSMUST00000189343 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21901-201ENSMUST00000189568 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm29424-201ENSMUST00000189716 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm28599-201ENSMUST00000189838 694 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21867-201ENSMUST00000189917 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm29269-201ENSMUST00000190087 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21722-201ENSMUST00000190153 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm28423-201ENSMUST00000190701 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21899-201ENSMUST00000190745 696 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms