Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Rubie-203ENSMUST00000227803 2430 ntBASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap3Q99LM2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap3Q99LM2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm13015-201ENSMUST00000118674 204 ntBASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm27494-201ENSMUST00000184735 189 ntBASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap3Q99LM2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Cdk5rap3Q99LM2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms