Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm38241-201ENSMUST00000192641 898 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm18054-201ENSMUST00000207539 555 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm10012-201ENSMUST00000078252 192 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cstf1Q99LC2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Gm43822-201ENSMUST00000200285 476 ntBASIC13.87□□□□□ -0.19
Cstf1Q99LC2 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf1Q99LC2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm27514-201ENSMUST00000183692 110 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm18056-201ENSMUST00000207670 568 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm18061-201ENSMUST00000208350 562 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm18063-201ENSMUST00000208529 568 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm18052-201ENSMUST00000208750 559 ntBASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms