Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Mir497b-201ENSMUST00000093601 125 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Gm44719-201ENSMUST00000206404 149 ntBASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb1Q91Y08 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb1Q91Y08 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Mir698-201ENSMUST00000102164 109 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm12585-201ENSMUST00000117307 290 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm4804-201ENSMUST00000182234 999 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm17837-201ENSMUST00000186435 985 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gm43703-201ENSMUST00000200523 763 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb1Q91Y08 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms