Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Gm5566-201ENSMUST00000116118 459 ntBASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Gm29541-201ENSMUST00000191351 678 ntBASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Gm10253-201ENSMUST00000194270 940 ntBASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
H1fooQ8VIK3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm7774-201ENSMUST00000200064 533 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Chchd1-203ENSMUST00000224633 557 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H1fooQ8VIK3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Gm6736-201ENSMUST00000166583 948 ntBASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Gm27702-201ENSMUST00000184512 56 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms