Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Gm5479-201ENSMUST00000160578 435 ntBASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpa1Q8VEE4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa1Q8VEE4 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm36991-201ENSMUST00000191800 648 ntBASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms