Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm9719-201ENSMUST00000162765 543 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm6443-201ENSMUST00000203599 874 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm18027-201ENSMUST00000218947 619 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm1Q8VC85 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Gm29741-201ENSMUST00000192667 421 ntBASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm1Q8VC85 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.33□□□□□ -0.27
Lsm1Q8VC85 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm37714-201ENSMUST00000194742 342 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms