Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc9Q8VC31 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc9Q8VC31 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc9Q8VC31 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.71■□□□□ 0.26
Ccdc9Q8VC31 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc9Q8VC31 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc9Q8VC31 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Gm44454-201ENSMUST00000198541 138 ntBASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms