Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Mir1897-201ENSMUST00000122581 272 ntBASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm28631-201ENSMUST00000190740 334 ntBASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ushbp1Q8R370 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm6180-201ENSMUST00000065243 498 ntBASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm25857-201ENSMUST00000082788 129 ntBASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ushbp1Q8R370 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.58■□□□□ 0.09
Ushbp1Q8R370 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ushbp1Q8R370 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ushbp1Q8R370 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ushbp1Q8R370 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ushbp1Q8R370 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ushbp1Q8R370 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms