Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rpp40Q8R1F9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Gm18624-201ENSMUST00000220966 658 ntBASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Gm19220-201ENSMUST00000222682 803 ntBASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpp40Q8R1F9 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm14928-201ENSMUST00000120198 477 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm45668-201ENSMUST00000211271 493 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm15823-201ENSMUST00000064305 670 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpp40Q8R1F9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms