Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lrrtm1Q8K377 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.94□□□□□ -0.5
Lrrtm1Q8K377 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Gm45747-201ENSMUST00000212203 999 ntBASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Thap2-203ENSMUST00000218989 527 ntBASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrrtm1Q8K377 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms