Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cchcr1Q8K2I2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Dupd1-202ENSMUST00000224735 548 ntBASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cchcr1Q8K2I2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Gm24513-201ENSMUST00000174964 138 ntBASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Gm27397-201ENSMUST00000184997 107 ntBASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Gm16476-201ENSMUST00000221544 139 ntBASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.46■□□□□ 0.23
Cchcr1Q8K2I2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cchcr1Q8K2I2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Gm10253-201ENSMUST00000194270 940 ntBASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms