Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfwd3Q8CIK8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gm6916-202ENSMUST00000205523 195 ntBASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Rfwd3Q8CIK8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfwd3Q8CIK8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms