Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ShfQ8CG80 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ShfQ8CG80 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ShfQ8CG80 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ShfQ8CG80 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
ShfQ8CG80 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm5566-201ENSMUST00000116118 459 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm18889-201ENSMUST00000174284 929 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm27741-201ENSMUST00000185060 237 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Gm18206-201ENSMUST00000207027 926 ntBASIC12.4□□□□□ -0.42
ShfQ8CG80 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
ShfQ8CG80 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ShfQ8CG80 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
ShfQ8CG80 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ShfQ8CG80 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.39□□□□□ -0.43
ShfQ8CG80 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Mir1895-201ENSMUST00000122615 79 ntBASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.39□□□□□ -0.43
ShfQ8CG80 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.39□□□□□ -0.43
ShfQ8CG80 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ShfQ8CG80 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.39□□□□□ -0.43
ShfQ8CG80 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ShfQ8CG80 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms