Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.19■□□□□ 0.34
Smc5Q8CG46 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc5Q8CG46 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm25287-201ENSMUST00000103846 110 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm22918-201ENSMUST00000103855 110 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm4995-201ENSMUST00000117247 432 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm27494-201ENSMUST00000184735 189 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm27741-201ENSMUST00000185060 237 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.18■□□□□ 0.34
Smc5Q8CG46 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc5Q8CG46 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Gm9719-201ENSMUST00000162765 543 ntBASIC17.17■□□□□ 0.34
Smc5Q8CG46 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc5Q8CG46 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.16■□□□□ 0.34
Smc5Q8CG46 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms