Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc28bQ8CEG5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc28bQ8CEG5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc28bQ8CEG5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Thap2-203ENSMUST00000218989 527 ntBASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms