Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vcpip1Q8CDG3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vcpip1Q8CDG3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Mir7023-201ENSMUST00000185093 64 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm44335-201ENSMUST00000196879 141 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm44297-201ENSMUST00000198304 141 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm44346-201ENSMUST00000198851 141 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vcpip1Q8CDG3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Gm43125-201ENSMUST00000201724 730 ntBASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcpip1Q8CDG3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcpip1Q8CDG3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms