Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf31Q8CCF0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.21■□□□□ 0.02
Prpf31Q8CCF0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Gm12341-201ENSMUST00000119724 503 ntBASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Gm29741-201ENSMUST00000192667 421 ntBASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf31Q8CCF0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Gm12138-201ENSMUST00000122180 951 ntBASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf31Q8CCF0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Gm24420-201ENSMUST00000176676 59 ntBASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms