Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd4Q8CC84 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Gm14140-201ENSMUST00000119999 995 ntBASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lysmd4Q8CC84 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.46□□□□□ -0.42
Lysmd4Q8CC84 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gm6973-201ENSMUST00000117080 721 ntBASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms