Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.19■□□□□ 0.18
Alx1Q8C8B0 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm14928-201ENSMUST00000120198 477 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm7063-201ENSMUST00000186840 981 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.18■□□□□ 0.18
Alx1Q8C8B0 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Gm6180-201ENSMUST00000065243 498 ntBASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Alx1Q8C8B0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Gm17330-201ENSMUST00000221047 165 ntBASIC16.16■□□□□ 0.18
Alx1Q8C8B0 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Alx1Q8C8B0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.15■□□□□ 0.18
Alx1Q8C8B0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx1Q8C8B0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx1Q8C8B0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms