Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm11543-201ENSMUST00000120758 370 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm11025-201ENSMUST00000140773 466 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm18737-201ENSMUST00000173594 937 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps9d1Q8C190 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps9d1Q8C190 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Vps9d1Q8C190 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.02□□□□□ -0.32
Vps9d1Q8C190 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps9d1Q8C190 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps9d1Q8C190 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps9d1Q8C190 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps9d1Q8C190 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps9d1Q8C190 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps9d1Q8C190 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms