Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpsf4Q8BQZ5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm29310-201ENSMUST00000185468 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21825-201ENSMUST00000185728 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm29109-201ENSMUST00000185895 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21896-201ENSMUST00000186520 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21873-201ENSMUST00000186728 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21794-201ENSMUST00000187056 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21880-201ENSMUST00000187275 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21826-201ENSMUST00000187451 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21198-201ENSMUST00000188393 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21749-201ENSMUST00000189343 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21901-201ENSMUST00000189568 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm29424-201ENSMUST00000189716 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm28599-201ENSMUST00000189838 694 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21867-201ENSMUST00000189917 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm29269-201ENSMUST00000190087 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21722-201ENSMUST00000190153 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm28423-201ENSMUST00000190701 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21899-201ENSMUST00000190745 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21910-201ENSMUST00000191163 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21849-201ENSMUST00000191571 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm28678-201ENSMUST00000191593 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm20910-201ENSMUST00000193268 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm21871-201ENSMUST00000194621 696 ntBASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpsf4Q8BQZ5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Gm17837-201ENSMUST00000186435 985 ntBASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 455 ms