Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp54Q8BL06 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Gm37466-201ENSMUST00000195692 652 ntBASIC19.42■□□□□ 0.7
Usp54Q8BL06 Gm10608-202ENSMUST00000213924 676 ntBASIC19.42■□□□□ 0.7
Usp54Q8BL06 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp54Q8BL06 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp54Q8BL06 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC19.41■□□□□ 0.7
Usp54Q8BL06 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.41■□□□□ 0.7
Usp54Q8BL06 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp54Q8BL06 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Snord83b-201ENSMUST00000104546 94 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm14381-201ENSMUST00000122105 414 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm2383-201ENSMUST00000181461 807 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm7899-201ENSMUST00000192935 1897 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm6082-201ENSMUST00000215204 454 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 AC122371.3-201ENSMUST00000223402 1061 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Mettl6-204ENSMUST00000227595 1027 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.4■□□□□ 0.7
Usp54Q8BL06 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp54Q8BL06 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp54Q8BL06 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Nupl1-207ENSMUST00000225311 2475 ntBASIC19.39■□□□□ 0.69
Usp54Q8BL06 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.39■□□□□ 0.69
Usp54Q8BL06 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp54Q8BL06 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp54Q8BL06 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.38■□□□□ 0.69
Usp54Q8BL06 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp54Q8BL06 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Gm20482-202ENSMUST00000174729 825 ntBASIC19.38■□□□□ 0.69
Usp54Q8BL06 Gm27320-201ENSMUST00000184892 109 ntBASIC19.38■□□□□ 0.69
Usp54Q8BL06 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp54Q8BL06 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp54Q8BL06 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms