Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdhr3Q8BL00 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdhr3Q8BL00 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdhr3Q8BL00 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdhr3Q8BL00 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdhr3Q8BL00 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdhr3Q8BL00 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdhr3Q8BL00 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Gm38225-201ENSMUST00000194001 393 ntBASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdhr3Q8BL00 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Gm13823-201ENSMUST00000119930 345 ntBASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms