Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc5a7Q8BGY9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Slc5a7Q8BGY9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Slc5a7Q8BGY9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms