Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.75□□□□□ -0.21
Ubp1Q811S7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm4875-201ENSMUST00000118257 786 ntBASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm37714-201ENSMUST00000194742 342 ntBASIC13.74□□□□□ -0.21
Ubp1Q811S7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.74□□□□□ -0.21
Ubp1Q811S7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.74□□□□□ -0.21
Ubp1Q811S7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ubp1Q811S7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gm14057-201ENSMUST00000120631 482 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gm15487-201ENSMUST00000122373 465 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.73□□□□□ -0.21
Ubp1Q811S7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ubp1Q811S7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms