Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Mir698-201ENSMUST00000102164 109 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Mir1247-201ENSMUST00000116706 82 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm15198-201ENSMUST00000117283 177 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm12384-201ENSMUST00000119228 919 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm11803-201ENSMUST00000119966 444 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm5161-201ENSMUST00000075243 853 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm24447-201ENSMUST00000083977 338 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp6nlQ80XC3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Gm29741-201ENSMUST00000192667 421 ntBASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Gm8598-201ENSMUST00000221184 836 ntBASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp6nlQ80XC3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm5187-201ENSMUST00000117317 991 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm16177-201ENSMUST00000120728 718 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm27514-201ENSMUST00000183692 110 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.29■□□□□ 0.04
Usp6nlQ80XC3 Gm40466-201ENSMUST00000212174 422 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms