Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Zc3h4Q6ZPZ3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Zc3h4Q6ZPZ3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zc3h4Q6ZPZ3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zc3h4Q6ZPZ3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm24255-201ENSMUST00000104481 128 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm29396-201ENSMUST00000185659 716 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm18935-201ENSMUST00000212692 664 ntBASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zc3h4Q6ZPZ3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zc3h4Q6ZPZ3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm12241-201ENSMUST00000118330 726 ntBASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Gm16379-201ENSMUST00000161469 348 ntBASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zc3h4Q6ZPZ3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms