Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Gm18195-201ENSMUST00000207604 706 ntBASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Gm14140-201ENSMUST00000119999 995 ntBASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scaf4Q6PFF0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scaf4Q6PFF0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm29310-201ENSMUST00000185468 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21825-201ENSMUST00000185728 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm29109-201ENSMUST00000185895 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21896-201ENSMUST00000186520 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21873-201ENSMUST00000186728 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21794-201ENSMUST00000187056 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21880-201ENSMUST00000187275 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21826-201ENSMUST00000187451 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21198-201ENSMUST00000188393 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21749-201ENSMUST00000189343 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21901-201ENSMUST00000189568 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm29424-201ENSMUST00000189716 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm28599-201ENSMUST00000189838 694 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21867-201ENSMUST00000189917 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm29269-201ENSMUST00000190087 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21722-201ENSMUST00000190153 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm28423-201ENSMUST00000190701 696 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms