Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm7399-201ENSMUST00000032395 858 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Gm28693-202ENSMUST00000190758 331 ntBASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Gm43179-201ENSMUST00000198797 275 ntBASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup98Q6PFD9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Gm11793-201ENSMUST00000120433 981 ntBASIC16.1■□□□□ 0.17
Nup98Q6PFD9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Gm6023-201ENSMUST00000118217 606 ntBASIC16.1■□□□□ 0.17
Nup98Q6PFD9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.1■□□□□ 0.17
Nup98Q6PFD9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup98Q6PFD9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Gm45930-201ENSMUST00000221330 292 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms