Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm12203-201ENSMUST00000118235 598 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm12209-201ENSMUST00000120089 596 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm27501-201ENSMUST00000183599 107 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm38241-201ENSMUST00000192641 898 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm37008-201ENSMUST00000195712 319 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Itm2b-204ENSMUST00000228637 783 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Efs-202ENSMUST00000227037 2540 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm13350-201ENSMUST00000120519 479 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm4271-201ENSMUST00000174444 973 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Mir3102-201ENSMUST00000175555 104 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm27682-201ENSMUST00000183930 110 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm45930-201ENSMUST00000221330 292 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snrnp40Q6PE01 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm22018-201ENSMUST00000104357 131 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm5687-201ENSMUST00000118252 640 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm7584-201ENSMUST00000175829 940 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm18827-201ENSMUST00000188341 790 ntBASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms